Slovenian MAP Stage 2 Synthetic PGx Allele Frequency Dataset

Derived Slovenian synthetic pharmacogenomics dataset for MAP Stage 2 testing. The dataset contains a population-level sites-only VCF generated from the source synthetic dataset using the Genome of Europe pgx_pilot workflow. It includes aggregate allele frequency and QC statistics and does not contain individual genotypes.

Data and Resources

Additional Info

Field Value
Title Slovenian MAP Stage 2 Synthetic PGx Allele Frequency Dataset
Description

Derived Slovenian synthetic pharmacogenomics dataset for MAP Stage 2 testing. The dataset contains a population-level sites-only VCF generated from the source synthetic dataset using the Genome of Europe pgx_pilot workflow. It includes aggregate allele frequency and QC statistics and does not contain individual genotypes.
Keywords
Contact points
Contact point 1
URI
https://gdi.openscience.si/id/vcard/502e2534-db18-4932-89a4-e9fa6b16f0ce
Name
Aleš Čep
Name (translations)
{'en': 'Aleš Čep'}
Email
ales.cep@um.si
Identifier
https://gdi.openscience.si/id/vcard/502e2534-db18-4932-89a4-e9fa6b16f0ce
URL
  1. https://lhrs.feri.um.si/en/members/ales-cep/
Publisher
Publisher 1
URI
Name
University of Maribor
Name (translations)
{'en': 'University of Maribor'}
Email
support@lhrs.si
URL
https://www.um.si/en/home-page/
Type
Publisher note
Publisher type
  1. http://example.com/resource/authority/publisher-type/university
Identifier
['4944e954-7769-463f-87ad-f168a27415a3']
Country
[]
Creator
Creator 1
URI
Name
University of Maribor
Name (translations)
{'en': 'University of Maribor'}
Email
support@lhrs.si
URL
https://www.um.si/en/home-page/
Type
Publisher note
Publisher type
  1. http://example.com/resource/authority/publisher-type/university
Identifier
['4944e954-7769-463f-87ad-f168a27415a3']
Country
[]
Landing page https://rems.gdi.lhrs.si/
Release date 2026-09-01T00:00:00+00:00
Modification date 2026-11-01T00:00:00+00:00
In Series
    Version 1.0
    Version notes
    Dataset status
    Identifier GDI-SI-UM-0000002
    Frequency
    Provenance
    Type https://publications.europa.eu/resource/authority/dataset-type/SYNTHETIC_DATA
    Temporal coverage
    Temporal resolution
    Spatial coverage
    Spatial resolution in meters
    Access rights http://publications.europa.eu/resource/authority/access-right/PUBLIC
    Other identifier
    Theme
    1. http://publications.europa.eu/resource/authority/data-theme/HEAL
    Language
    1. http://id.loc.gov/vocabulary/iso639-1/en
    Documentation
    Conforms to
    1. http://data.gdi.eu/core/p2/ExternallyGoverned
    Is referenced by
    Distribution
    1. https://fdp.gdi.lhrs.si/distribution/69ed421e-b42f-465e-af06-4ee04a0f46dc
    2. https://fdp.gdi.lhrs.si/distribution/a090536e-64b7-4373-a262-c38698995610
    Sample
    Analytics
    Applicable legislation
    1. http://data.europa.eu/eli/reg/2016/679/oj
    Has version
    Code values
    Coding system
    Purpose
    Health category
    1. http://data.gdi.eu/core/p2/HealthCategoryHumanGenetic
    Health theme
    1. https://hdeu-dcat.acceptance.data.health.europa.eu/resource/authority/health-theme/HEALTH_SYSTEMS
    Legal basis
    Minimum typical age
    Maximum typical age
    Number of records
    Number of records for unique individuals.
    Personal data
    Publisher note
    Publisher type
    Trusted Data Holder
    Population coverage
    Retention period
    Health data access body
    Health data access body 1
    URI
    Name
    University of Maribor
    Name (translations)
    {'en': 'University of Maribor'}
    Email
    support@lhrs.si
    URL
    https://www.um.si/en/home-page/
    Type
    http://example.com/resource/authority/publisher-type/university
    Identifier
    ['4944e954-7769-463f-87ad-f168a27415a3']
    Country
    []
    Qualified relation
    Was generated by
    Qualified attribution
    Quality annotations
    URI https://fdp.gdi.lhrs.si/dataset/5470153a-779b-4a46-8a75-a3be79749758